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ZNF827 zinc finger protein 827 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100579324, updated on 8-Mar-2024

Summary

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Gene symbol
ZNF827
Gene description
zinc finger protein 827
See related
EnsemblRapid:ENSNLEG00000005560
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7b
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 7b NC_044387.1 (66438948..66614577, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 7b NC_019822.1 (69418175..69595683, complement)

Chromosome 7b - NC_044387.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-like protein 5 Neighboring gene chromosome 7b C4orf51 homolog Neighboring gene thioredoxin Neighboring gene uncharacterized LOC100580001 Neighboring gene LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene reeler domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 827

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044387.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    66438948..66614577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030816201.1 → XP_030672061.1  zinc finger protein 827 isoform X2

  2. XM_003257774.4 → XP_003257822.2  zinc finger protein 827 isoform X1

    Related
    ENSNLEP00000052318.1, ENSNLET00000063504.1
    Conserved Domains (5) summary
    COG5048
    Location:355 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:819 → 839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:1146 → 1170
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:1131 → 1155
    zf-H2C2_5; C2H2-type zinc-finger domain

  3. XM_030816202.1 → XP_030672062.1  zinc finger protein 827 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:343 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:364 → 384
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:807 → 827
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:1134 → 1158
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:1119 → 1143
    zf-H2C2_5; C2H2-type zinc-finger domain

  4. XM_030816204.1 → XP_030672064.1  zinc finger protein 827 isoform X5

    UniProtKB/TrEMBL
    G1R0M5
    Related
    ENSNLEP00000006746.1, ENSNLET00000007085.3
    Conserved Domains (5) summary
    COG5048
    Location:355 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:819 → 839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:817 → 839
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:832 → 856
    zf-H2C2_2; Zinc-finger double domain

  5. XM_030816206.1 → XP_030672066.1  zinc finger protein 827 isoform X6

    Conserved Domains (5) summary
    COG5048
    Location:355 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:819 → 839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:817 → 839
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:832 → 856
    zf-H2C2_2; Zinc-finger double domain

  6. XM_030816205.1 → XP_030672065.1  zinc finger protein 827 isoform X6

    Conserved Domains (5) summary
    COG5048
    Location:355 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:819 → 839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:817 → 839
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:832 → 856
    zf-H2C2_2; Zinc-finger double domain

  7. XM_030816203.1 → XP_030672063.1  zinc finger protein 827 isoform X4

    Conserved Domains (4) summary
    COG5048
    Location:355 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:819 → 839
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:832 → 856
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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