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ell2 elongation factor for RNA polymerase II 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100562602, updated on 8-Mar-2024

Summary

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Gene symbol
ell2
Gene description
elongation factor for RNA polymerase II 2
See related
Ensembl:ENSACAG00000012873
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (276676317..276727590)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 2 NC_014777.1 (26089303..26142062, complement)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134296699 Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene uncharacterized LOC134296700 Neighboring gene uncharacterized LOC134296701 Neighboring gene glutaredoxin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II elongation factor ELL2
Names
elongation factor, RNA polymerase II, 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    276676317..276727590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003216373.4 → XP_003216421.1  RNA polymerase II elongation factor ELL2 isoform X1

    UniProtKB/TrEMBL
    A0A803TX46, G1KMZ0
    Related
    ENSACAP00000012677.3
    Conserved Domains (3) summary
    pfam06752
    Location:275 → 402
    E_Pc_C; Enhancer of Polycomb C-terminus
    pfam07303
    Location:534 → 631
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:6 → 284
    ELL; RNA polymerase II elongation factor ELL

  2. XM_062972247.1 → XP_062828317.1  RNA polymerase II elongation factor ELL2 isoform X2

Nucleotide Protein
Heading Accession and Version

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