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ctnnal1 catenin alpha like 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100561634, updated on 8-Mar-2024

Summary

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Gene symbol
ctnnal1
Gene description
catenin alpha like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 4 NC_085844.1 (96887225..96955922, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 4 NC_014779.1 (67510020..67567670)

Chromosome 4 - NC_085844.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134299030 Neighboring gene solute carrier family 39 member 6 Neighboring gene actin binding transcription modulator Neighboring gene uncharacterized LOC134299029 Neighboring gene uncharacterized LOC134299031

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-catulin
Names
catenin (cadherin-associated protein), alpha-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085844.1 Reference rAnoCar3.1.pri

    Range
    96887225..96955922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062980833.1 → XP_062836903.1  alpha-catulin isoform X3

  2. XM_062980832.1 → XP_062836902.1  alpha-catulin isoform X2

  3. XM_062980831.1 → XP_062836901.1  alpha-catulin isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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