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lox lysyl oxidase [ Anolis carolinensis (green anole) ]

Gene ID: 100558882, updated on 8-Mar-2024

Summary

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Gene symbol
lox
Gene description
lysyl oxidase
See related
Ensembl:ENSACAG00000003698
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (263035781..263057482)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338740.1 (11726806..11748519, complement)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene synuclein alpha interacting protein Neighboring gene ancient vomeronasal 1 receptor Neighboring gene zinc finger protein 475 Neighboring gene serum response factor binding protein 1 Neighboring gene proline rich 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-lysine 6-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen fibril organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-lysine 6-oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    263035781..263057482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003223011.4 → XP_003223059.1  protein-lysine 6-oxidase isoform X2

    UniProtKB/TrEMBL
    A0A803TWD4
    Related
    ENSACAP00000039524.1
    Conserved Domains (1) summary
    pfam01186
    Location:210 → 406
    Lysyl_oxidase; Lysyl oxidase

  2. XM_008114050.3 → XP_008112257.1  protein-lysine 6-oxidase isoform X1

    UniProtKB/TrEMBL
    H9G810
    Related
    ENSACAP00000003666.3
    Conserved Domains (1) summary
    pfam01186
    Location:210 → 406
    Lysyl_oxidase; Lysyl oxidase
Nucleotide Protein
Heading Accession and Version

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