U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tnnt1 troponin T1, slow skeletal type [ Anolis carolinensis (green anole) ]

Gene ID: 100558563, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
tnnt1
Gene description
troponin T1, slow skeletal type
See related
Ensembl:ENSACAG00000016780
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 6 NC_085846.1 (16033184..16057862)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338876.1 (871177..895847)

Chromosome 6 - NC_085846.1Genomic Context describing neighboring genes Neighboring gene leukocyte immunoglobulin-like receptor subfamily A member 2 Neighboring gene fucosyltransferase 2 (H blood group) Neighboring gene protein phosphatase 1 regulatory subunit 12C Neighboring gene EPS8 signaling adaptor L1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tropomyosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables troponin T binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomere organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in slow-twitch skeletal muscle fiber contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of troponin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
troponin T, slow skeletal muscle
Names
troponin T type 1 (skeletal, slow)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085846.1 Reference rAnoCar3.1.pri

    Range
    16033184..16057862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008118469.3 → XP_008116676.1  troponin T, slow skeletal muscle isoform X3

    UniProtKB/TrEMBL
    A0A803TWA9
    Conserved Domains (1) summary
    pfam00992
    Location:66 → 201
    Troponin; Troponin

  2. XM_008118465.3 → XP_008116672.1  troponin T, slow skeletal muscle isoform X1

    UniProtKB/TrEMBL
    A0A803TWA9, H9GNM6
    Related
    ENSACAP00000016567.4
    Conserved Domains (1) summary
    pfam00992
    Location:66 → 201
    Troponin; Troponin

  3. XM_003225850.4 → XP_003225898.1  troponin T, slow skeletal muscle isoform X2

    UniProtKB/TrEMBL
    A0A803T1G6, A0A803TWA9
    Related
    ENSACAP00000029056.1
    Conserved Domains (1) summary
    pfam00992
    Location:55 → 190
    Troponin; Troponin

  4. XM_062957867.1 → XP_062813937.1  troponin T, slow skeletal muscle isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.