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TRUB1 TruB pseudouridine synthase family member 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100548652, updated on 8-Mar-2024

Summary

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Gene symbol
TRUB1
Gene description
TruB pseudouridine synthase family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 8 NC_015018.2 (28074302..28084550)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 8 NC_015018.1 (30676294..30703090)

Chromosome 8 - NC_015018.2Genomic Context describing neighboring genes Neighboring gene attractin-like protein 1 Neighboring gene attractin-like protein 1 Neighboring gene uncharacterized LOC104912039 Neighboring gene FHF complex subunit HOOK interacting protein 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tRNA pseudouridine synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015018.2 Reference Turkey_5.1 Primary Assembly

    Range
    28074302..28084550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019617835.2 → XP_019473380.1  probable tRNA pseudouridine synthase 1

    Conserved Domains (1) summary
    cl00130
    Location:3 → 195
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
Nucleotide Protein
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