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FBF1 Fas binding factor 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100541116, updated on 8-Mar-2024

Summary

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Gene symbol
FBF1
Gene description
Fas binding factor 1
See related
Ensembl:ENSMGAG00000004527
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
32
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 20 NC_015030.2 (5477107..5490930)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 20 NC_015030.1 (4609202..4624091)

Chromosome 20 - NC_015030.2Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 65 Neighboring gene acyl-CoA oxidase 1 Neighboring gene signal recognition particle 68 Neighboring gene envoplakin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of epithelial cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary transition fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fas-binding factor 1
Names
fas-binding factor 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015030.2 Reference Turkey_5.1 Primary Assembly

    Range
    5477107..5490930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031556322.1 → XP_031412182.1  fas-binding factor 1 isoform X3

    Conserved Domains (4) summary
    PHA03247
    Location:317 → 597
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:680 → 1010
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00529
    Location:602 → 753
    HlyD; HlyD membrane-fusion protein of T1SS
    pfam02601
    Location:965 → 1075
    Exonuc_VII_L; Exonuclease VII, large subunit

  2. XM_031556320.1 → XP_031412180.1  fas-binding factor 1 isoform X1

    Conserved Domains (4) summary
    PHA03247
    Location:318 → 598
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:681 → 1011
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00529
    Location:603 → 754
    HlyD; HlyD membrane-fusion protein of T1SS
    pfam02601
    Location:966 → 1076
    Exonuc_VII_L; Exonuclease VII, large subunit

  3. XM_031556323.1 → XP_031412183.1  fas-binding factor 1 isoform X4

    Conserved Domains (3) summary
    PHA03247
    Location:318 → 591
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:666 → 996
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02601
    Location:951 → 1061
    Exonuc_VII_L; Exonuclease VII, large subunit

  4. XM_031556321.1 → XP_031412181.1  fas-binding factor 1 isoform X2

    Conserved Domains (4) summary
    PHA03247
    Location:319 → 597
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:680 → 1010
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00529
    Location:602 → 753
    HlyD; HlyD membrane-fusion protein of T1SS
    pfam02601
    Location:965 → 1075
    Exonuc_VII_L; Exonuclease VII, large subunit

  5. XM_010721384.3 → XP_010719686.1  fas-binding factor 1 isoform X5

    UniProtKB/TrEMBL
    G1MZC6
    Related
    ENSMGAP00000004384.3, ENSMGAT00000005100.3
    Conserved Domains (3) summary
    PHA03247
    Location:318 → 586
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:652 → 982
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02601
    Location:937 → 1047
    Exonuc_VII_L; Exonuclease VII, large subunit

  6. XM_010721386.3 → XP_010719688.1  fas-binding factor 1 isoform X6

    Conserved Domains (3) summary
    PHA03247
    Location:317 → 585
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:651 → 981
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02601
    Location:936 → 1046
    Exonuc_VII_L; Exonuclease VII, large subunit
Nucleotide Protein
Heading Accession and Version

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