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SMAD9 SMAD family member 9 [ Meleagris gallopavo (turkey) ]

Gene ID: 100539337, updated on 8-Mar-2024

Summary

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Gene symbol
SMAD9
Gene description
SMAD family member 9
See related
Ensembl:ENSMGAG00000015060
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 1 NC_015011.2 (172136945..172168086)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 1 NC_015011.1 (179839216..179859290)

Chromosome 1 - NC_015011.2Genomic Context describing neighboring genes Neighboring gene cyclin A1 Neighboring gene serine rich and transmembrane domain containing 1 Neighboring gene uncharacterized LOC100540575 Neighboring gene ALG5 dolichyl-phosphate beta-glucosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mothers against decapentaplegic homolog 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015011.2 Reference Turkey_5.1 Primary Assembly

    Range
    172136945..172168086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003203374.4 → XP_003203422.2  LOW QUALITY PROTEIN: mothers against decapentaplegic homolog 9

    UniProtKB/TrEMBL
    A0A803XPE8
    Related
    ENSMGAP00000032776.1, ENSMGAT00000034807.1
    Conserved Domains (2) summary
    cd10490
    Location:13 → 136
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:276 → 476
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
Nucleotide Protein
Heading Accession and Version

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