kcnj13 potassium inwardly rectifying channel subfamily J member 13 [Oreochromis niloticus (Nile tilapia)] - Gene

Summary

Gene symbol: kcnj13
Gene description: potassium inwardly rectifying channel subfamily J member 13
See related: Ensembl:ENSONIG00000006690
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Oreochromis niloticus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as: kir7.1
Expression: Biased expression in brain (RPKM 2.1), eye (RPKM 0.8) and 2 other tissues See more
Orthologs: human zebrafish all
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Genomic context

Location:: chromosome: LG14

Exon count:: 3

Annotation release	Status	Assembly	LG	Location
104	current	O_niloticus_UMD_NMBU (GCF_001858045.2)	LG14	NC_031979.2 (4650889..4662825, complement)
103	previous assembly	ASM185804v2 (GCF_001858045.1)	LG14	NC_031979.1 (38286557..38298378)

Linkage Group LG14 - NC_031979.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Oreochromis niloticus Transcriptome or Gene expression
Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
BioProject: PRJNA78915
Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables inward rectifier potassium channel activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in potassium ion import across plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of monoatomic ion transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: inward rectifier potassium channel 13; inward rectifier potassium channel 7.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001279632.1 → NP_001266561.1 inward rectifier potassium channel 13

See identical proteins and their annotated locations for NP_001266561.1

Status: PROVISIONAL

Source sequence(s)

AB290816

UniProtKB/TrEMBL

A7BI89

Conserved Domains (2) summary

pfam17655
Location:189 → 338

IRK_C; Inward rectifier potassium channel C-terminal domain

cl21560
Location:29 → 182

Ion_trans_2; Ion channel