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IL10RA interleukin 10 receptor subunit alpha [ Sus scrofa (pig) ]

Gene ID: 100525654, updated on 8-Mar-2024

Summary

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Official Symbol
IL10RAprovided by VGNC
Official Full Name
interleukin 10 receptor subunit alphaprovided by VGNC
Primary source
VGNC:VGNC:89077
See related
Ensembl:ENSSSCG00000015085
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in spleen (RPKM 66.5), lung (RPKM 23.3) and 5 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (45310527..45324557)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (50364900..50378929)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene FXYD domain containing ion transport regulator 6 Neighboring gene transmembrane serine protease 13 Neighboring gene uncharacterized LOC100622439 Neighboring gene transmembrane serine protease 4 Neighboring gene sodium voltage-gated channel beta subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-10 receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    45310527..45324557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005656637.3 → XP_005656694.1  interleukin-10 receptor subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A0B8RSR7, A0A8D0JSH3, A0A8D0QNE6, A0A8D0XN59, F1SAM5
    Related
    ENSSSCP00000016008.3, ENSSSCT00000016451.5
    Conserved Domains (2) summary
    pfam01108
    Location:20 → 111
    Tissue_fac; Tissue factor
    cl21522
    Location:129 → 223
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_021062907.1 → XP_020918566.1  interleukin-10 receptor subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A8D0XUK3
    Conserved Domains (1) summary
    cl21522
    Location:64 → 158
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein Strain
Heading Accession and Version

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