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DNAH6 dynein axonemal heavy chain 6 [ Sus scrofa (pig) ]

Gene ID: 100524798, updated on 8-Mar-2024

Summary

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Official Symbol
DNAH6provided by VGNC
Official Full Name
dynein axonemal heavy chain 6provided by VGNC
Primary source
VGNC:VGNC:106573
See related
Ensembl:ENSSSCG00000045529
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 1.7), lung (RPKM 1.4) and 2 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
78
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (59859858..60114274, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (62982989..63131658)

Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene thymosin beta 10 Neighboring gene TraB domain containing 2A Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha Neighboring gene cytokine receptor-like factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables minus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein heavy chain 6, axonemal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

    Range
    59859858..60114274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021087305.1 → XP_020942964.1  dynein heavy chain 6, axonemal isoform X1

    UniProtKB/TrEMBL
    A0A5G2R780, A0A8D1VFC6
    Related
    ENSSSCP00000069987.1, ENSSSCT00000067002.2
    Conserved Domains (3) summary
    pfam03028
    Location:3407 → 4150
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08393
    Location:883 → 1296
    DHC_N2; Dynein heavy chain, N-terminal region 2
    cl25937
    Location:1116 → 3773
    MT; Microtubule-binding stalk of dynein motor

  2. XM_021087306.1 → XP_020942965.1  dynein heavy chain 6, axonemal isoform X2

    UniProtKB/TrEMBL
    A0A8D1VFC6
    Conserved Domains (3) summary
    pfam03028
    Location:3391 → 4134
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08393
    Location:867 → 1280
    DHC_N2; Dynein heavy chain, N-terminal region 2
    cl25937
    Location:1100 → 3757
    MT; Microtubule-binding stalk of dynein motor

  3. XM_021087308.1 → XP_020942967.1  dynein heavy chain 6, axonemal isoform X4

    UniProtKB/TrEMBL
    A0A8D1VFC6
    Conserved Domains (3) summary
    pfam03028
    Location:3078 → 3821
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08393
    Location:554 → 967
    DHC_N2; Dynein heavy chain, N-terminal region 2
    cl25937
    Location:787 → 3444
    MT; Microtubule-binding stalk of dynein motor

  4. XM_021087307.1 → XP_020942966.1  dynein heavy chain 6, axonemal isoform X3

    UniProtKB/TrEMBL
    A0A8D0Q723
    Conserved Domains (3) summary
    pfam03028
    Location:3407 → 3744
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08393
    Location:883 → 1296
    DHC_N2; Dynein heavy chain, N-terminal region 2
    cl25937
    Location:1116 → 3736
    MT; Microtubule-binding stalk of dynein motor

  5. XM_021087309.1 → XP_020942968.1  dynein heavy chain 6, axonemal isoform X5

    UniProtKB/TrEMBL
    A0A8D0Q723
    Conserved Domains (3) summary
    pfam03028
    Location:3407 → 3565
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08393
    Location:883 → 1296
    DHC_N2; Dynein heavy chain, N-terminal region 2
    cl25937
    Location:1116 → 3346
    MT; Microtubule-binding stalk of dynein motor
Nucleotide Protein
Heading Accession and Version

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