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PITPNM3 PITPNM family member 3 [ Sus scrofa (pig) ]

Gene ID: 100524106, updated on 8-Mar-2024

Summary

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Gene symbol
PITPNM3
Gene description
PITPNM family member 3
See related
Ensembl:ENSSSCG00000017890
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 4.7), lung (RPKM 2.0) and 4 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (50806302..50898316)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (52805485..52896806)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene chromosome 12 C17orf100 homolog Neighboring gene KIAA0753 ortholog Neighboring gene thioredoxin domain containing 17 Neighboring gene mediator complex subunit 31 Neighboring gene PICALM interacting mitotic regulator Neighboring gene aryl hydrocarbon receptor interacting protein like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
membrane-associated phosphatidylinositol transfer protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    50806302..50898316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013981242.2 → XP_013836696.1  membrane-associated phosphatidylinositol transfer protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8D0PAE6
    Related
    ENSSSCP00000045236.2, ENSSSCT00000057129.3
    Conserved Domains (2) summary
    smart00775
    Location:687 → 817
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:341 → 541
    DDHD; DDHD domain

  2. XM_021067716.1 → XP_020923375.1  membrane-associated phosphatidylinositol transfer protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8D1JAC1
    Related
    ENSSSCP00000055385.1, ENSSSCT00000051348.3
    Conserved Domains (2) summary
    smart00775
    Location:739 → 869
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    pfam02862
    Location:393 → 593
    DDHD; DDHD domain
Nucleotide Protein
Heading Accession and Version

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