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    PDE8B phosphodiesterase 8B [ Sus scrofa (pig) ]

    Gene ID: 100522306, updated on 10-Jun-2013
    Gene symbol
    PDE8B
    Gene description
    phosphodiesterase 8B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Location :
    chromosome: 2
    Sequence :
    Chromosome: 2; NC_010444.3 (87663022..87931210)
    See PDE8B in MapViewer

    Chromosome 2 - NC_010444.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100520366 Neighboring gene NFU1 iron-sulfur cluster scaffold homolog, mitochondrial-like Neighboring gene WD repeat-containing protein 41-like Neighboring gene homeobox protein orthopedia-like

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Markers

    Genotypes

    Homology

    Names
    phosphodiesterase 8B

    RefSeqs of Annotated Genomes: Build 4.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa10.2 Primary Assembly

    Genomic

    1. NC_010444.3

      Range
      87663022..87931210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003123726.3 → XP_003123774.2  

      Conserved Domains (4) summary
      cd00077
      Location:508 – 698
      Blast Score: 90
      HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
      cd00130
      Location:173 – 270
      Blast Score: 88
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam00072
      Location:29 – 146
      Blast Score: 163
      Response_reg; Response regulator receiver domain
      pfam13426
      Location:178 – 271
      Blast Score: 135
      PAS_9; PAS domain
    Nucleotide Protein
    Heading Accession and Version
    genomic CU463910.2 (96063..129975) None
    genomic CU463974.2 (10556..28981) None
    genomic CU928493.2 None

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • SNP
        Related SNP records
      • SNP: GeneView
        SNPs linked from GeneView
      • Taxonomy
        Link to related taxonomy entry
      • UniSTS
        Related UniSTS records

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