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JHY junctional cadherin complex regulator [ Sus scrofa (pig) ]

Gene ID: 100521569, updated on 8-Mar-2024

Summary

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Official Symbol
JHYprovided by VGNC
Official Full Name
junctional cadherin complex regulatorprovided by VGNC
Primary source
VGNC:VGNC:89283
See related
Ensembl:ENSSSCG00000015138
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
C9H11orf63
Expression
Biased expression in lung (RPKM 1.2), ovary (RPKM 0.5) and 1 other tissue See more
Orthologs
human mouse all
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Genomic context

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See JHY in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (49826428..49887758)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (55172134..55233153)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene ubiquitin associated and SH3 domain containing B Neighboring gene cytotoxic and regulatory T cell molecule Neighboring gene brain specific homeobox Neighboring gene heat shock protein family A (Hsp70) member 8 Neighboring gene CXADR like membrane protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C11orf63 homolog
Names
chromosome 9 C11orf63 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    49826428..49887758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005667440.2 → XP_005667497.2  uncharacterized protein C11orf63 homolog

    UniProtKB/TrEMBL
    A0A4X1VEU6, A0A8D0R1S7, A0A8D1I3C2, A0A8D1X2Z1, F1S9Q5
    Conserved Domains (1) summary
    pfam15261
    Location:656 → 768
    DUF4591; Domain of unknown function (DUF4591)

  2. XM_013979491.2 → XP_013834945.2  uncharacterized protein C11orf63 homolog

    UniProtKB/TrEMBL
    A0A4X1VEU6, A0A8D0R1S7, A0A8D1I3C2, A0A8D1X2Z1, F1S9Q5
    Related
    ENSSSCP00000016061.3, ENSSSCT00000016504.4
    Conserved Domains (1) summary
    pfam15261
    Location:656 → 768
    DUF4591; Domain of unknown function (DUF4591)
Nucleotide Protein
Heading Accession and Version

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