U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACBD4 acyl-CoA binding domain containing 4 [ Sus scrofa (pig) ]

Gene ID: 100520929, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
ACBD4provided by VGNC
Official Full Name
acyl-CoA binding domain containing 4provided by VGNC
Primary source
VGNC:VGNC:98971
See related
Ensembl:ENSSSCG00000017337
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 5.5), liver (RPKM 3.0) and 8 other tissues See more
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (18271835..18281639, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (18519805..18528834, complement)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene HEXIM P-TEFb complex subunit 2 Neighboring gene HEXIM P-TEFb complex subunit 1 Neighboring gene phospholipase C delta 3 Neighboring gene N-myristoyltransferase 1 Neighboring gene dephospho-CoA kinase domain containing

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acyl-CoA-binding domain-containing protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    18271835..18281639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013980882.2 → XP_013836336.1  acyl-CoA-binding domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8D0LVV6, A0A8D0NHP8
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  2. XM_003358011.4 → XP_003358059.1  acyl-CoA-binding domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A4X1THN5, A0A8D1AUL5, F1RR18
    Related
    ENSSSCP00000018369.4, ENSSSCT00000018873.4
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  3. XM_021066847.1 → XP_020922506.1  acyl-CoA-binding domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A8D0RXX8, A0A8D1B212, A0A8D1KD50
    Conserved Domains (2) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein
    cl27351
    Location:92 → 271
    E3_binding; e3 binding domain

  4. XM_021066848.1 → XP_020922507.1  acyl-CoA-binding domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A4X1THN5, A0A8D0UR71, A0A8D1PMU1
    Conserved Domains (2) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein
    cl27351
    Location:92 → 271
    E3_binding; e3 binding domain

  5. XM_013980881.2 → XP_013836335.1  acyl-CoA-binding domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8D0RXX8
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  6. XM_013980880.2 → XP_013836334.1  acyl-CoA-binding domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8D0RXX8
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  7. XM_021066849.1 → XP_020922508.1  acyl-CoA-binding domain-containing protein 4 isoform X7

    UniProtKB/TrEMBL
    A0A4X1THN5, A0A8D0UR71, A0A8D1PMU1
    Conserved Domains (2) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein
    cl27351
    Location:92 → 271
    E3_binding; e3 binding domain

  8. XM_021066850.1 → XP_020922509.1  acyl-CoA-binding domain-containing protein 4 isoform X10

  9. XM_003131324.5 → XP_003131372.1  acyl-CoA-binding domain-containing protein 4 isoform X9

    UniProtKB/TrEMBL
    A0A8D0KEJ2
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  10. XM_005668722.3 → XP_005668779.1  acyl-CoA-binding domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8D0LVW2
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

  11. XM_013980883.2 → XP_013836337.1  acyl-CoA-binding domain-containing protein 4 isoform X8

    UniProtKB/TrEMBL
    A0A8D0KEJ2
    Conserved Domains (1) summary
    pfam00887
    Location:13 → 93
    ACBP; Acyl CoA binding protein

RNA

  1. XR_002337093.1 RNA Sequence

  2. XR_002337089.1 RNA Sequence

  3. XR_002337092.1 RNA Sequence

  4. XR_002337094.1 RNA Sequence

  5. XR_002337087.1 RNA Sequence

  6. XR_002337088.1 RNA Sequence

  7. XR_002337090.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.