LOC100491706 NACHT, LRR and PYD domains-containing protein 14 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: LOC100491706provided by Xenbase
Official Full Name: NACHT, LRR and PYD domains-containing protein 14provided by Xenbase
Primary source: Xenbase:XB-GENE-29080811
See related: Ensembl:ENSXETG00000035571
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

Location:: chromosome: 8

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	8	NC_030684.2 (138679482..138694379)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	8	NC_030684.1 (115424300..115438683)

Chromosome 8 - NC_030684.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

Orthologs from OrthoDB

General protein information

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Preferred Names: NACHT, LRR and PYD domains-containing protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

138679482..138694379

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031891610.1 → XP_031747470.1 NACHT, LRR and PYD domains-containing protein 14 isoform X2

UniProtKB/TrEMBL

A0A803JQL7, F7DA22

Related

ENSXETP00000110274.1, ENSXETT00000115964.1

Conserved Domains (3) summary

pfam17776
Location:541 → 651

NLRC4_HD2; NLRC4 helical domain HD2

cl39015
Location:653 → 805

LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

cl40481
Location:241 → 406

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_002944393.5 → XP_002944439.2 NACHT, LRR and PYD domains-containing protein 14 isoform X1

See identical proteins and their annotated locations for XP_002944439.2

UniProtKB/TrEMBL

A0A6I8RNW0, F7DA22

Related

ENSXETP00000086821.2, ENSXETT00000092962.2

Conserved Domains (4) summary

sd00033
Location:687 → 710

LRR_RI; leucine-rich repeat [structural motif]

pfam17776
Location:541 → 651

NLRC4_HD2; NLRC4 helical domain HD2

cl38985
Location:241 → 406

P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

cl39015
Location:653 → 801

LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...