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emilin2 elastin microfibril interfacer 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100491397, updated on 8-Mar-2024

Summary

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Official Symbol
emilin2provided by Xenbase
Official Full Name
elastin microfibril interfacer 2provided by Xenbase
Primary source
Xenbase:XB-GENE-978931
See related
Ensembl:ENSXETG00000001613
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
foap-10; emilin-2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (107138154..107190685, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (92087329..92141160, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene myomesin 1 Neighboring gene lipin 2 Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1 Neighboring gene methyltransferase 4, N6-adenosine Neighboring gene uncharacterized LOC116411768

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
EMILIN-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    107138154..107190685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012965329.3 → XP_012820783.1  EMILIN-2

    UniProtKB/TrEMBL
    A0A803KCV3, F6W1F9
    Related
    ENSXETP00000003398.4, ENSXETT00000003398.5
    Conserved Domains (6) summary
    COG1196
    Location:168 → 502
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK10263
    Location:789 → 892
    PRK10263; DNA translocase FtsK; Provisional
    pfam03157
    Location:806 → 981
    Glutenin_hmw; High molecular weight glutenin subunit
    pfam07546
    Location:51 → 119
    EMI; EMI domain
    NF033422
    Location:589 → 786
    onco_T4SS_CagA; type IV secretion system oncogenic effector CagA
    cl23878
    Location:1022 → 1160
    C1q; C1q domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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