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avd.2 avidin, gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100487365, updated on 7-Sep-2023

Summary

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Official Symbol
avd.2provided by Xenbase
Official Full Name
avidin, gene 2provided by Xenbase
Primary source
Xenbase:XB-GENE-5995460
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See avd.2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (44590242..44595539)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (36002295..36007594)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene tRNA splicing endonuclease subunit 54 Neighboring gene LLGL2, scribble cell polarity complex component Neighboring gene myosin XVB Neighboring gene RecQ helicase-like 5 Neighboring gene uncharacterized LOC105945252

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables biotin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
avidin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    44590242..44595539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002939983.5 → XP_002940029.2  avidin

    UniProtKB/TrEMBL
    A0A8J0QWD7
    Conserved Domains (1) summary
    pfam01382
    Location:30 → 141
    Avidin; Avidin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases