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LOC100486739 mucosal pentraxin [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100486739, updated on 18-Aug-2023

Summary

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Official Symbol
LOC100486739provided by Xenbase
Official Full Name
mucosal pentraxinprovided by Xenbase
Primary source
Xenbase:XB-GENE-29078467
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (121337969..121344612)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (100720696..100721754)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene intelectin-1a-like Neighboring gene amyloid P component, serum, gene 2 Neighboring gene C-reactive protein, pentraxin-related, gene 2 Neighboring gene butyrophilin subfamily 3 member A2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
mucosal pentraxin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    121337969..121344612
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002937398.3 → XP_002937444.3  mucosal pentraxin

    UniProtKB/TrEMBL
    A0A8J0QQH7, F6U216
    Conserved Domains (1) summary
    cd00152
    Location:47 → 243
    PTX; Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated ...
Nucleotide Protein Strain
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