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TANK TRAF family member associated NFKB activator [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100484543, updated on 8-Mar-2024

Summary

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Gene symbol
TANK
Gene description
TRAF family member associated NFKB activator
Locus tag
PANDA_013897
See related
Ensembl:ENSAMEG00000012404
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TANK in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (130867858..130959276)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218100.1 (353767..444794, complement)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene actin, cytoplasmic 1-like Neighboring gene uncharacterized LOC117801083 Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene proteasome 26S subunit, non-ATPase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    130867858..130959276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019805128.2 → XP_019660687.1  TRAF family member-associated NF-kappa-B activator isoform X3

    UniProtKB/TrEMBL
    D2HPY4

  2. XM_019805126.2 → XP_019660685.1  TRAF family member-associated NF-kappa-B activator isoform X3

    UniProtKB/TrEMBL
    D2HPY4
    Related
    ENSAMEP00000036012.1, ENSAMET00000035653.1

  3. XM_019805125.2 → XP_019660684.1  TRAF family member-associated NF-kappa-B activator isoform X3

    UniProtKB/TrEMBL
    D2HPY4

  4. XM_019805124.2 → XP_019660683.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    D2HPY4

  5. XM_011231375.3 → XP_011229677.1  TRAF family member-associated NF-kappa-B activator isoform X2

    UniProtKB/TrEMBL
    D2HPY4
    Conserved Domains (1) summary
    pfam12845
    Location:154 → 205
    TBD; TBD domain

  6. XM_034654622.1 → XP_034510513.1  TRAF family member-associated NF-kappa-B activator isoform X6

    UniProtKB/TrEMBL
    D2HPY4

  7. XM_034654621.1 → XP_034510512.1  TRAF family member-associated NF-kappa-B activator isoform X5

    UniProtKB/TrEMBL
    D2HPY4

  8. XM_034654620.1 → XP_034510511.1  TRAF family member-associated NF-kappa-B activator isoform X4

    UniProtKB/TrEMBL
    D2HPY4
Nucleotide Protein
Heading Accession and Version

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