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RNF216 ring finger protein 216 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482162, updated on 8-Mar-2024

Summary

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Gene symbol
RNF216
Gene description
ring finger protein 216
Locus tag
PANDA_004596
See related
Ensembl:ENSAMEG00000006634
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 10 NC_048227.1 (3799001..3945176, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217433.1 (1689287..1833275, complement)

Chromosome 10 - NC_048227.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105236381 Neighboring gene uncharacterized LOC109489189 Neighboring gene fascin actin-bundling protein 1 Neighboring gene uncharacterized LOC117804117 Neighboring gene zinc finger protein 300-like Neighboring gene uncharacterized LOC117804118

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF216

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048227.1 Reference ASM200744v2 Primary Assembly

    Range
    3799001..3945176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002916464.4 → XP_002916510.1  E3 ubiquitin-protein ligase RNF216 isoform X2

    UniProtKB/TrEMBL
    D2H497
    Conserved Domains (1) summary
    pfam01485
    Location:660 → 710
    IBR; IBR domain, a half RING-finger domain

  2. XM_002916465.4 → XP_002916511.1  E3 ubiquitin-protein ligase RNF216 isoform X1

    UniProtKB/TrEMBL
    D2H497, G1LJA1
    Related
    ENSAMEP00000007006.1, ENSAMET00000007303.2
    Conserved Domains (1) summary
    pfam01485
    Location:717 → 767
    IBR; IBR domain, a half RING-finger domain

  3. XM_034669766.1 → XP_034525657.1  E3 ubiquitin-protein ligase RNF216 isoform X1

    UniProtKB/TrEMBL
    D2H497, G1LJA1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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