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ASB5 ankyrin repeat and SOCS box containing 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100481380, updated on 8-Mar-2024

Summary

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Gene symbol
ASB5
Gene description
ankyrin repeat and SOCS box containing 5
Locus tag
PANDA_018121
See related
Ensembl:ENSAMEG00000008769
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See ASB5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 18 NC_048235.1 (5818892..5869433, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218739.1 (10200..60740)

Chromosome 18 - NC_048235.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 17 Neighboring gene spermatogenesis associated 4 Neighboring gene signal peptidase complex subunit 3 Neighboring gene uncharacterized LOC117797092

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048235.1 Reference ASM200744v2 Primary Assembly

    Range
    5818892..5869433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002928157.4 → XP_002928203.1  ankyrin repeat and SOCS box protein 5 isoform X1

    See identical proteins and their annotated locations for XP_002928203.1

    UniProtKB/TrEMBL
    D2HZ95
    Related
    ENSAMEP00000043035.1, ENSAMET00000047970.1
    Conserved Domains (4) summary
    cd00204
    Location:71 → 188
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:173 → 263
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:71 → 100
    ANK; ANK repeat [structural motif]
    cl02533
    Location:288 → 329
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

  2. XM_019808948.2 → XP_019664507.1  ankyrin repeat and SOCS box protein 5 isoform X4

    UniProtKB/TrEMBL
    A0A7N5KJ94
    Related
    ENSAMEP00000041072.1, ENSAMET00000027704.1

  3. XM_019808947.2 → XP_019664506.1  ankyrin repeat and SOCS box protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A7N5KAR5
    Related
    ENSAMEP00000037397.1, ENSAMET00000046296.1

  4. XM_034647659.1 → XP_034503550.1  ankyrin repeat and SOCS box protein 5 isoform X3

    UniProtKB/TrEMBL
    G1LQA1
    Related
    ENSAMEP00000009232.2, ENSAMET00000009630.2
Nucleotide Protein
Heading Accession and Version

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