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P4HA2 prolyl 4-hydroxylase subunit alpha 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100480972, updated on 8-Mar-2024

Summary

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Gene symbol
P4HA2
Gene description
prolyl 4-hydroxylase subunit alpha 2
Locus tag
PANDA_000722
See related
Ensembl:ENSAMEG00000017663
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (21318049..21354773, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217300.1 (1073367..1109160, complement)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100473502 Neighboring gene 40S ribosomal protein S19-like Neighboring gene PDZ and LIM domain 4 Neighboring gene uncharacterized LOC117801462 Neighboring gene solute carrier family 22 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    21318049..21354773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034655983.1 → XP_034511874.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JAK6, G1MH26

  2. XM_034655987.1 → XP_034511878.1  prolyl 4-hydroxylase subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JAK6

  3. XM_034655985.1 → XP_034511876.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JAK6, G1MH26
    Related
    ENSAMEP00000018660.2, ENSAMET00000019407.2

  4. XM_034655986.1 → XP_034511877.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JAK6, G1MH26

  5. XM_034655988.1 → XP_034511879.1  prolyl 4-hydroxylase subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JAK6
    Related
    ENSAMEP00000035853.1, ENSAMET00000029580.1

  6. XM_034655989.1 → XP_034511880.1  prolyl 4-hydroxylase subunit alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A7N5JAK6

  7. XM_034655984.1 → XP_034511875.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JAK6, G1MH26
Nucleotide Protein
Heading Accession and Version

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