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SLC1A3 solute carrier family 1 member 3 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100479747, updated on 8-Mar-2024

Summary

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Gene symbol
SLC1A3
Gene description
solute carrier family 1 member 3
Locus tag
PANDA_012540
See related
Ensembl:ENSAMEG00000012282
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (119101562..119178192, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217977.1 (442705..518882, complement)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109490245 Neighboring gene uncharacterized LOC117801598 Neighboring gene uncharacterized LOC117801597 Neighboring gene uncharacterized LOC117801599 Neighboring gene RAN binding protein 3 like Neighboring gene NAD kinase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neutral L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-aspartate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-aspartate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-glutamate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
excitatory amino acid transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    119101562..119178192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034657011.1 → XP_034512902.1  excitatory amino acid transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A7N5J8R3, D2HLY6
    Related
    ENSAMEP00000042656.1, ENSAMET00000042076.1

  2. XM_002923368.4 → XP_002923414.1  excitatory amino acid transporter 1 isoform X1

    See identical proteins and their annotated locations for XP_002923414.1

    UniProtKB/TrEMBL
    A0A7N5J8R3, D2HLY6
    Related
    ENSAMEP00000035409.1, ENSAMET00000040405.1
    Conserved Domains (1) summary
    pfam00375
    Location:50 → 497
    SDF; Sodium:dicarboxylate symporter family

  3. XM_019803933.2 → XP_019659492.1  excitatory amino acid transporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5KMU8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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