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REV1 REV1 DNA directed polymerase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100479167, updated on 8-Mar-2024

Summary

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Gene symbol
REV1
Gene description
REV1 DNA directed polymerase
Locus tag
PANDA_008679
See related
Ensembl:ENSAMEG00000013212
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (67160115..67226532)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217663.1 (351160..418368)

Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene LON peptidase N-terminal domain and ring finger 2 Neighboring gene ALF transcription elongation factor 3 Neighboring gene eukaryotic translation initiation factor 5B Neighboring gene thioredoxin domain containing 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deoxycytidyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in error-free translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in error-prone translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein REV1
Names
REV1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048221.1 Reference ASM200744v2 Primary Assembly

    Range
    67160115..67226532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011225874.3 → XP_011224176.1  DNA repair protein REV1 isoform X2

    UniProtKB/TrEMBL
    D2HDC3
    Conserved Domains (5) summary
    cd01701
    Location:347 → 822
    PolY_Rev1; DNA polymerase Rev1
    smart00292
    Location:46 → 118
    BRCT; breast cancer carboxy-terminal domain
    COG0389
    Location:417 → 802
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]
    pfam14377
    Location:939 → 1045
    DUF4414; Domain of unknown function (DUF4414)
    pfam16727
    Location:1131 → 1251
    REV1_C; DNA repair protein REV1 C-terminal domain

  2. XM_002919954.4 → XP_002920000.1  DNA repair protein REV1 isoform X1

    UniProtKB/TrEMBL
    D2HDC3, G1M3Q2
    Related
    ENSAMEP00000013965.2, ENSAMET00000014546.2
    Conserved Domains (5) summary
    cd01701
    Location:347 → 823
    PolY_Rev1; DNA polymerase Rev1
    smart00292
    Location:46 → 118
    BRCT; breast cancer carboxy-terminal domain
    COG0389
    Location:417 → 803
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]
    pfam14377
    Location:940 → 1046
    DUF4414; Domain of unknown function (DUF4414)
    pfam16727
    Location:1132 → 1252
    REV1_C; DNA repair protein REV1 C-terminal domain

  3. XM_011225876.3 → XP_011224178.1  DNA repair protein REV1 isoform X3

    See identical proteins and their annotated locations for XP_011224178.1

    UniProtKB/TrEMBL
    A0A7N5JF38, D2HDC3
    Conserved Domains (5) summary
    cd01701
    Location:277 → 753
    PolY_Rev1; DNA polymerase Rev1
    smart00292
    Location:4 → 48
    BRCT; breast cancer carboxy-terminal domain
    COG0389
    Location:347 → 733
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]
    pfam14377
    Location:870 → 976
    DUF4414; Domain of unknown function (DUF4414)
    pfam16727
    Location:1062 → 1182
    REV1_C; DNA repair protein REV1 C-terminal domain

  4. XM_011225875.3 → XP_011224177.1  DNA repair protein REV1 isoform X3

    See identical proteins and their annotated locations for XP_011224177.1

    UniProtKB/TrEMBL
    A0A7N5JF38, D2HDC3
    Related
    ENSAMEP00000024516.1, ENSAMET00000025861.1
    Conserved Domains (5) summary
    cd01701
    Location:277 → 753
    PolY_Rev1; DNA polymerase Rev1
    smart00292
    Location:4 → 48
    BRCT; breast cancer carboxy-terminal domain
    COG0389
    Location:347 → 733
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]
    pfam14377
    Location:870 → 976
    DUF4414; Domain of unknown function (DUF4414)
    pfam16727
    Location:1062 → 1182
    REV1_C; DNA repair protein REV1 C-terminal domain

  5. XM_019800418.2 → XP_019655977.1  DNA repair protein REV1 isoform X3

    UniProtKB/TrEMBL
    A0A7N5JF38, D2HDC3

  6. XM_019800421.2 → XP_019655980.1  DNA repair protein REV1 isoform X4

  7. XM_019800419.2 → XP_019655978.1  DNA repair protein REV1 isoform X4

  8. XM_019800420.2 → XP_019655979.1  DNA repair protein REV1 isoform X4

RNA

  1. XR_004624827.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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