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HDDC3 HD domain containing 3 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100474639, updated on 8-Mar-2024

Summary

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Gene symbol
HDDC3
Gene description
HD domain containing 3
Locus tag
PANDA_008496
See related
Ensembl:ENSAMEG00000013735
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 9 NC_048226.1 (5285530..5287181, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217650.1 (251336..252982)

Chromosome 9 - NC_048226.1Genomic Context describing neighboring genes Neighboring gene FES proto-oncogene, tyrosine kinase Neighboring gene mannosidase alpha class 2A member 2 Neighboring gene protein shisa-like-1 Neighboring gene unc-45 myosin chaperone A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048226.1 Reference ASM200744v2 Primary Assembly

    Range
    5285530..5287181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002919786.4 → XP_002919832.1  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 isoform X2

    See identical proteins and their annotated locations for XP_002919832.1

    UniProtKB/TrEMBL
    D2HCZ1
    Related
    ENSAMEP00000014466.1, ENSAMET00000015070.2
    Conserved Domains (2) summary
    COG0317
    Location:4 → 137
    SpoT; (p)ppGpp synthase/hydrolase, HD superfamily [Signal transduction mechanisms, Transcription]
    pfam13328
    Location:11 → 138
    HD_4; HD domain

  2. XM_019800239.2 → XP_019655798.1  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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