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DEPDC1B DEP domain containing 1B [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100474022, updated on 8-Mar-2024

Summary

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Gene symbol
DEPDC1B
Gene description
DEP domain containing 1B
Locus tag
PANDA_004399
See related
Ensembl:ENSAMEG00000004311
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See DEPDC1B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (40174500..40258153, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217422.1 (2368645..2456610)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene tubulin alpha-1D chain-like Neighboring gene protein YIPF5-like Neighboring gene ELOVL fatty acid elongase 7 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene ERCC excision repair 8, CSA ubiquitin ligase complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEP domain-containing protein 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    40174500..40258153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034656263.1 → XP_034512154.1  DEP domain-containing protein 1B isoform X2

    UniProtKB/TrEMBL
    D2H3V1, G1LCE7
    Related
    ENSAMEP00000004575.2, ENSAMET00000004760.2

  2. XM_034656262.1 → XP_034512153.1  DEP domain-containing protein 1B isoform X1

    UniProtKB/TrEMBL
    D2H3V1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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