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AGA aspartylglucosaminidase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100472378, updated on 8-Mar-2024

Summary

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Gene symbol
AGA
Gene description
aspartylglucosaminidase
Locus tag
PANDA_014191
See related
Ensembl:ENSAMEG00000003696
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 18 NC_048235.1 (6879318..6888916, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218136.1 (445804..455796)

Chromosome 18 - NC_048235.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117797114 Neighboring gene U6 spliceosomal RNA Neighboring gene nei like DNA glycosylase 3 Neighboring gene uncharacterized LOC117797076 Neighboring gene importin subunit alpha-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048235.1 Reference ASM200744v2 Primary Assembly

    Range
    6879318..6888916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002924740.4 → XP_002924786.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X3

    UniProtKB/TrEMBL
    A0A7N5KI22
    Conserved Domains (1) summary
    cd04513
    Location:29 → 322
    Glycosylasparaginase; Glycosylasparaginase and similar proteins

  2. XM_019805423.2 → XP_019660982.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2

    UniProtKB/TrEMBL
    A0A7N5KI22

  3. XM_002924739.4 → XP_002924785.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X1

    UniProtKB/TrEMBL
    A0A7N5KI22, G1LAI5
    Related
    ENSAMEP00000003908.2, ENSAMET00000004066.2
    Conserved Domains (1) summary
    cd04513
    Location:29 → 332
    Glycosylasparaginase; Glycosylasparaginase and similar proteins
Nucleotide Protein
Heading Accession and Version

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