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PTPN7 protein tyrosine phosphatase non-receptor type 7 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100470829, updated on 8-Mar-2024

Summary

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Gene symbol
PTPN7
Gene description
protein tyrosine phosphatase non-receptor type 7
See related
Ensembl:ENSAMEG00000011949
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 8 NC_048225.1 (101826918..101838063, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217343.1 (236720..248298)

Chromosome 8 - NC_048225.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 37 like 1 Neighboring gene ADP ribosylation factor like GTPase 8A Neighboring gene receptor-type tyrosine-protein phosphatase V-like Neighboring gene leucine rich repeat containing G protein-coupled receptor 6 Neighboring gene ubiquitin conjugating enzyme E2 T

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048225.1 Reference ASM200744v2 Primary Assembly

    Range
    101826918..101838063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011218884.3 → XP_011217186.1  tyrosine-protein phosphatase non-receptor type 7 isoform X1

    See identical proteins and their annotated locations for XP_011217186.1

    UniProtKB/TrEMBL
    G1LZS3
    Conserved Domains (2) summary
    smart00194
    Location:96 → 348
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:122 → 348
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  2. XM_011218887.3 → XP_011217189.1  tyrosine-protein phosphatase non-receptor type 7 isoform X2

    Conserved Domains (2) summary
    smart00194
    Location:96 → 347
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:121 → 347
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  3. XM_034667046.1 → XP_034522937.1  tyrosine-protein phosphatase non-receptor type 7 isoform X1

    UniProtKB/TrEMBL
    G1LZS3
    Related
    ENSAMEP00000012583.2, ENSAMET00000013118.2
Nucleotide Protein
Heading Accession and Version

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