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TMEM170B transmembrane protein 170B [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100470420, updated on 8-Mar-2024

Summary

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Gene symbol
TMEM170B
Gene description
transmembrane protein 170B
Locus tag
PANDA_003993
See related
Ensembl:ENSAMEG00000002711
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 5 NC_048222.1 (14833194..14867631, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217399.1 (1114422..1147178)

Chromosome 5 - NC_048222.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC105236116 Neighboring gene androgen dependent TFPI regulating protein Neighboring gene neural precursor cell expressed, developmentally down-regulated 9 Neighboring gene small integral membrane protein 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 170B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048222.1 Reference ASM200744v2 Primary Assembly

    Range
    14833194..14867631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002915914.4 → XP_002915960.1  transmembrane protein 170B

    See identical proteins and their annotated locations for XP_002915960.1

    UniProtKB/TrEMBL
    D2H2W3
    Related
    ENSAMEP00000002838.1, ENSAMET00000002959.2
    Conserved Domains (1) summary
    pfam10190
    Location:30 → 128
    Tmemb_170; Putative transmembrane protein 170
Nucleotide Protein
Heading Accession and Version

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