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PTPN11 protein tyrosine phosphatase non-receptor type 11 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100468867, updated on 8-Mar-2024

Summary

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Gene symbol
PTPN11
Gene description
protein tyrosine phosphatase non-receptor type 11
Locus tag
PANDA_014747
See related
Ensembl:ENSAMEG00000008525
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (9435023..9511227)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218196.1 (404950..462134)

Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene HECT domain E3 ubiquitin protein ligase 4 Neighboring gene ribosomal protein L6 Neighboring gene rabphilin 3A Neighboring gene 2'-5'-oligoadenylate synthetase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048229.1 Reference ASM200744v2 Primary Assembly

    Range
    9435023..9511227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034639676.1 → XP_034495567.1  tyrosine-protein phosphatase non-receptor type 11 isoform X1

    UniProtKB/TrEMBL
    D2HRU9, G1LPR6
    Related
    ENSAMEP00000009046.2, ENSAMET00000009431.2
    Conserved Domains (3) summary
    cd09931
    Location:111 → 218
    SH2_C-SH2_SHP_like; C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins
    cd10340
    Location:5 → 103
    SH2_N-SH2_SHP_like; N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins
    cd14605
    Location:272 → 528
    PTPc-N11; catalytic domain of tyrosine-protein phosphatase non-receptor type 11

  2. XM_034639677.1 → XP_034495568.1  tyrosine-protein phosphatase non-receptor type 11 isoform X2

    UniProtKB/TrEMBL
    D2HRU9
    Conserved Domains (3) summary
    cd09931
    Location:111 → 218
    SH2_C-SH2_SHP_like; C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins
    cd10340
    Location:5 → 103
    SH2_N-SH2_SHP_like; N-terminal Src homology 2 (N-SH2) domain found in SH2 domain Phosphatases (SHP) proteins
    cd14605
    Location:272 → 524
    PTPc-N11; catalytic domain of tyrosine-protein phosphatase non-receptor type 11
Nucleotide Protein
Heading Accession and Version

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