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UBAP2 ubiquitin associated protein 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466122, updated on 8-Mar-2024

Summary

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Gene symbol
UBAP2
Gene description
ubiquitin associated protein 2
Locus tag
PANDA_019427
See related
Ensembl:ENSAMEG00000000333
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
31
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (23873491..24000453, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219055.1 (207495..330663)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 6 Neighboring gene ubiquitin conjugating enzyme E2 R2 Neighboring gene small nucleolar RNA SNORD121A Neighboring gene small nucleolar RNA SNORD121A Neighboring gene DDB1 and CUL4 associated factor 12 Neighboring gene ubiquitin associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    23873491..24000453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019809925.2 → XP_019665484.1  ubiquitin-associated protein 2 isoform X6

    UniProtKB/TrEMBL
    D2I246, G1L0K6
    Related
    ENSAMEP00000000408.2, ENSAMET00000000423.2

  2. XM_011237252.3 → XP_011235554.1  ubiquitin-associated protein 2 isoform X6

    UniProtKB/TrEMBL
    D2I246, G1L0K6
    Conserved Domains (2) summary
    cd14277
    Location:53 → 90
    UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
    pfam12478
    Location:512 → 541
    DUF3697; Ubiquitin-associated protein 2

  3. XM_034664029.1 → XP_034519920.1  ubiquitin-associated protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A7N5P594
    Related
    ENSAMEP00000034162.1, ENSAMET00000030812.1

  4. XM_034664026.1 → XP_034519917.1  ubiquitin-associated protein 2 isoform X4

    UniProtKB/TrEMBL
    D2I246

  5. XM_034664025.1 → XP_034519916.1  ubiquitin-associated protein 2 isoform X3

    UniProtKB/TrEMBL
    D2I246

  6. XM_019809927.2 → XP_019665486.1  ubiquitin-associated protein 2 isoform X1

    UniProtKB/TrEMBL
    D2I246
    Related
    ENSAMEP00000042125.1, ENSAMET00000043380.1

  7. XM_034664028.1 → XP_034519919.1  ubiquitin-associated protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A7N5P7A1
    Related
    ENSAMEP00000035138.1, ENSAMET00000025326.1

  8. XM_034664027.1 → XP_034519918.1  ubiquitin-associated protein 2 isoform X5

    UniProtKB/TrEMBL
    D2I246

  9. XM_034664024.1 → XP_034519915.1  ubiquitin-associated protein 2 isoform X2

    UniProtKB/TrEMBL
    D2I246
Nucleotide Protein
Heading Accession and Version

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