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COTL1 coactosin like F-actin binding protein 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464879, updated on 8-Mar-2024

Summary

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Gene symbol
COTL1
Gene description
coactosin like F-actin binding protein 1
Locus tag
PANDA_001252
See related
Ensembl:ENSAMEG00000024628
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See COTL1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (77492875..77531508, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217308.1 (3186101..3224483)

Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel modifier subfamily G member 4 Neighboring gene WAP four-disulfide core domain 1 Neighboring gene ATPase secretory pathway Ca2+ transporting 2 Neighboring gene kelch like family member 36 Neighboring gene uncharacterized LOC117795303 Neighboring gene ubiquitin specific peptidase 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of polarized growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coactosin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048229.1 Reference ASM200744v2 Primary Assembly

    Range
    77492875..77531508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002913389.4 → XP_002913435.1  coactosin-like protein

    See identical proteins and their annotated locations for XP_002913435.1

    UniProtKB/TrEMBL
    D2GWP6
    Related
    ENSAMEP00000041475.1, ENSAMET00000041110.1
    Conserved Domains (1) summary
    cd11282
    Location:9 → 120
    ADF_coactosin_like; Coactosin-like members of the ADF homology domain family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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