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DMRT1 doublesex and mab-3 related transcription factor 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100458929, updated on 26-Mar-2024

Summary

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Gene symbol
DMRT1
Gene description
doublesex and mab-3 related transcription factor 1
Locus tag
CR201_G0001619
See related
Ensembl:ENSPPYG00000019261
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See DMRT1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 13 NC_071998.2 (57807271..57934060, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 9 NC_071994.1 (42110828..42237685, complement)

Chromosome 13 - NC_071998.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134759745 Neighboring gene doublesex and mab-3 related transcription factor 3 Neighboring gene uncharacterized LOC129047860 Neighboring gene KN motif and ankyrin repeat domains 1 Neighboring gene eukaryotic translation initiation factor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in germ cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sex differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
doublesex- and mab-3-related transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071998.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    57807271..57934060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002819836.6 → XP_002819882.3  doublesex- and mab-3-related transcription factor 1 isoform X2

  2. XM_054520005.2 → XP_054375980.2  doublesex- and mab-3-related transcription factor 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Miscellaneous