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LRRC20 leucine rich repeat containing 20 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454584, updated on 3-Apr-2024

Summary

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Gene symbol
LRRC20
Gene description
leucine rich repeat containing 20
Locus tag
CR201_G0049646
See related
Ensembl:ENSPPYG00000002372
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 8 NC_071993.2 (73607937..73705930)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 10 NC_071995.1 (69760910..69858733)

Chromosome 8 - NC_071993.2Genomic Context describing neighboring genes Neighboring gene nodal growth differentiation factor Neighboring gene eukaryotic translation initiation factor 4E binding protein 2 Neighboring gene centrosomal protein CEP57L1-like Neighboring gene neuropeptide FF receptor 1 Neighboring gene inorganic pyrophosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071993.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    73607937..73705930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024254051.3 → XP_024109819.2  leucine-rich repeat-containing protein 20 isoform X1

  2. XM_054522534.2 → XP_054378509.1  leucine-rich repeat-containing protein 20 isoform X2

    UniProtKB/TrEMBL
    A0A2J8RNH5, A0A8I5U2N5

  3. XM_024254052.3 → XP_024109820.1  leucine-rich repeat-containing protein 20 isoform X3

    UniProtKB/TrEMBL
    A0A2J8RNB4
    Conserved Domains (2) summary
    sd00031
    Location:7 → 29
    LRR_1; leucine-rich repeat [structural motif]
    cl26793
    Location:20 → 91
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

  4. XM_063727359.1 → XP_063583429.1  leucine-rich repeat-containing protein 20 isoform X2

    UniProtKB/TrEMBL
    A0A2J8RNH5, A0A8I5U2N5

  5. XM_063727358.1 → XP_063583428.1  leucine-rich repeat-containing protein 20 isoform X1

Nucleotide Protein
Heading Accession and Version

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