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ZNF688 zinc finger protein 688 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454256, updated on 26-Mar-2024

Summary

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Gene symbol
ZNF688
Gene description
zinc finger protein 688
Locus tag
CR201_G0034476
See related
Ensembl:ENSPPYG00000030268
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 18 NC_072003.2 (32760143..32764272, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 16 NC_072001.1 (32170947..32175080, complement)

Chromosome 18 - NC_072003.2Genomic Context describing neighboring genes Neighboring gene ribosomal protein uL30-like Neighboring gene zinc finger protein 764 Neighboring gene zinc finger protein 785 Neighboring gene uncharacterized LOC134760384

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 688

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072003.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    32760143..32764272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054534866.2 → XP_054390841.1  zinc finger protein 688 isoform X2

    UniProtKB/TrEMBL
    A0A2J8TKG9

  2. XM_054534867.2 → XP_054390842.1  zinc finger protein 688 isoform X3

  3. XM_009250647.3 → XP_009248922.1  zinc finger protein 688 isoform X1

    UniProtKB/TrEMBL
    A0A2J8TKN7, A0A8I5YM73
    Related
    ENSPPYP00000034122.1
    Conserved Domains (4) summary
    smart00349
    Location:26 → 86
    KRAB; krueppel associated box
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:183 → 205
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:198 → 222
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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