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PRR16 proline rich 16 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100452200, updated on 3-Apr-2024

Summary

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Gene symbol
PRR16
Gene description
proline rich 16
Locus tag
CR201_G0002740
See related
Ensembl:ENSPPYG00000015712
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (128693217..129021823)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (128781042..129112621)

Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134761421 Neighboring gene U6 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC112133372 Neighboring gene uncharacterized LOC129059513

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cell size IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Largen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    128693217..129021823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002815816.5 → XP_002815862.1  protein Largen isoform X2

    UniProtKB/TrEMBL
    A0A2J8XEB3, A0A2J8XED3, A0A663D9Z3, H2PGC7
    Related
    ENSPPYP00000017573.2
    Conserved Domains (1) summary
    pfam15252
    Location:53 → 304
    DUF4589; Domain of unknown function (DUF4589)

  2. XM_054555863.2 → XP_054411838.1  protein Largen isoform X1

  3. XM_063724233.1 → XP_063580303.1  protein Largen isoform X5

    UniProtKB/TrEMBL
    A0A2J8XED4

  4. XM_024247737.3 → XP_024103505.1  protein Largen isoform X5

    UniProtKB/TrEMBL
    A0A2J8XED4, A0A663D9Z3
    Conserved Domains (1) summary
    pfam15252
    Location:1 → 234
    DUF4589; Domain of unknown function (DUF4589)

  5. XM_063724232.1 → XP_063580302.1  protein Largen isoform X3

  6. XM_009240980.4 → XP_009239255.1  protein Largen isoform X4

    UniProtKB/TrEMBL
    A0A663D9Z3
    Conserved Domains (1) summary
    pfam15252
    Location:5 → 255
    DUF4589; Domain of unknown function (DUF4589)

  7. XM_063724234.1 → XP_063580304.1  protein Largen isoform X5

    UniProtKB/TrEMBL
    A0A2J8XED4

RNA

  1. XR_008525465.2 RNA Sequence

  2. XR_008525464.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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