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SFPQ splicing factor proline and glutamine rich [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100445899, updated on 26-Mar-2024

Summary

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Gene symbol
SFPQ
Gene description
splicing factor proline and glutamine rich
Locus tag
CR201_G0015707
See related
Ensembl:ENSPPYG00000001560
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (198355178..198372410)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (198237795..198255027)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene zinc finger MYM-type containing 4 Neighboring gene large ribosomal subunit protein uL18-like Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene uncharacterized LOC129051605 Neighboring gene zinc finger MYM-type containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
splicing factor, proline- and glutamine-rich

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    198355178..198372410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009252674.3 → XP_009250949.2  splicing factor, proline- and glutamine-rich

RNA

  1. XR_008515955.1 RNA Sequence

  2. XR_008515960.1 RNA Sequence

  3. XR_008515962.1 RNA Sequence

  4. XR_657182.3 RNA Sequence

  5. XR_002915417.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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