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TPBG trophoblast glycoprotein [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100444954, updated on 26-Mar-2024

Summary

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Gene symbol
TPBG
Gene description
trophoblast glycoprotein
Locus tag
CR201_G0023084
See related
Ensembl:ENSPPYG00000016800
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 5 NC_071990.2 (83064509..83067790)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 6 NC_071991.1 (82827908..82831010)

Chromosome 5 - NC_071990.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL23-like Neighboring gene single-stranded DNA-binding protein 2-like Neighboring gene uncharacterized LOC129059777 Neighboring gene ubiquitin protein ligase E3D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trophoblast glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071990.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    83064509..83067790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009242033.4 → XP_009240308.3  trophoblast glycoprotein

  2. XM_009242035.4 → XP_009240310.3  trophoblast glycoprotein

  3. XM_009242034.4 → XP_009240309.3  trophoblast glycoprotein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Miscellaneous