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EYA3 EYA transcriptional coactivator and phosphatase 3 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100436086, updated on 3-Apr-2024

Summary

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Gene symbol
EYA3
Gene description
EYA transcriptional coactivator and phosphatase 3
Locus tag
CR201_G0015908
See related
Ensembl:ENSPPYG00000001648
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (205483318..205689106)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (205365938..205571725)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129051779 Neighboring gene ATP synthase inhibitory factor subunit 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C8 Neighboring gene platelet activating factor receptor Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA Neighboring gene ADP-ribosylation factor-like protein 8B Neighboring gene uncharacterized LOC129051778 Neighboring gene sphingomyelin phosphodiesterase acid like 3B Neighboring gene XK related 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eyes absent homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    205483318..205689106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054538878.1 → XP_054394853.1  eyes absent homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8Y5S0, A0A6D2YB46, H2N8B5

  2. XM_002811181.5 → XP_002811227.1  eyes absent homolog 3 isoform X2

    See identical proteins and their annotated locations for XP_002811227.1

    UniProtKB/TrEMBL
    A0A2J8Y5S9
    Related
    ENSPPYP00000032450.1
    Conserved Domains (1) summary
    TIGR01658
    Location:256 → 527
    EYA-cons_domain; eyes absent protein conserved domain

  3. XM_003775759.4 → XP_003775807.1  eyes absent homolog 3 isoform X1

    See identical proteins and their annotated locations for XP_003775807.1

    UniProtKB/TrEMBL
    A0A2J8Y5S0, A0A6D2YB46, H2N8B5
    Related
    ENSPPYP00000001904.1
    Conserved Domains (1) summary
    TIGR01658
    Location:302 → 573
    EYA-cons_domain; eyes absent protein conserved domain

  4. XM_063713955.1 → XP_063570025.1  eyes absent homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8Y5S0, A0A6D2YB46, H2N8B5
Nucleotide Protein
Heading Accession and Version

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