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ZMAT4 zinc finger matrin-type 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100435892, updated on 3-Apr-2024

Summary

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Gene symbol
ZMAT4
Gene description
zinc finger matrin-type 4
Locus tag
CR201_G0033329
See related
Ensembl:ENSPPYG00000018540
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See ZMAT4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 7 NC_071992.2 (42575404..42947552, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 8 NC_071993.1 (43870660..44241834, complement)

Chromosome 7 - NC_071992.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134761849 Neighboring gene transcriptional and immune response regulator Neighboring gene uncharacterized LOC103891311 Neighboring gene uncharacterized LOC129060960 Neighboring gene uncharacterized LOC134761920 Neighboring gene uncharacterized LOC129060961 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071992.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    42575404..42947552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009243743.4 → XP_009242018.1  zinc finger matrin-type protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A2J8TNV3, A0A8I5U0W9
    Related
    ENSPPYP00000039033.1
    Conserved Domains (2) summary
    smart00451
    Location:72 → 106
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:77 → 99
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_002819032.5 → XP_002819078.1  zinc finger matrin-type protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A2J8TNV2, A0A2J8TNW2, A0A6D2XYP4, H2PQ57
    Related
    ENSPPYP00000020788.2
    Conserved Domains (3) summary
    smart00451
    Location:142 → 176
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:147 → 169
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:15 → 38
    zf-met; Zinc-finger of C2H2 type

  3. XM_054561500.2 → XP_054417475.1  zinc finger matrin-type protein 4 isoform X1

  4. XM_054561501.1 → XP_054417476.1  zinc finger matrin-type protein 4 isoform X3

Nucleotide Protein
Heading Accession and Version

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