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EDA2R ectodysplasin A2 receptor [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100435021, updated on 3-Apr-2024

Summary

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Gene symbol
EDA2R
Gene description
ectodysplasin A2 receptor
Locus tag
CR201_G0029088
See related
Ensembl:ENSPPYG00000020424
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See EDA2R in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) X NC_072008.2 (71327921..71372823, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) X NC_072008.1 (71329337..71372816, complement)

Chromosome X - NC_072008.2Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor 83-like Neighboring gene pyruvate kinase PKM-like Neighboring gene U6 spliceosomal RNA Neighboring gene polyadenylate-binding protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072008.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    71327921..71372823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063721093.1 → XP_063577163.1  tumor necrosis factor receptor superfamily member 27 isoform X3

  2. XM_063721094.1 → XP_063577164.1  tumor necrosis factor receptor superfamily member 27 isoform X4

  3. XM_063721095.1 → XP_063577165.1  tumor necrosis factor receptor superfamily member 27 isoform X4

  4. XM_009234936.4 → XP_009233211.1  tumor necrosis factor receptor superfamily member 27 isoform X3

    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  5. XM_024241086.3 → XP_024096854.1  tumor necrosis factor receptor superfamily member 27 isoform X4

    Related
    ENSPPYP00000040346.1
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  6. XM_063721096.1 → XP_063577166.1  tumor necrosis factor receptor superfamily member 27 isoform X4

  7. XM_063721097.1 → XP_063577167.1  tumor necrosis factor receptor superfamily member 27 isoform X4

  8. XM_024241088.3 → XP_024096856.1  tumor necrosis factor receptor superfamily member 27 isoform X6

  9. XM_024241087.3 → XP_024096855.1  tumor necrosis factor receptor superfamily member 27 isoform X5

  10. XM_063721092.1 → XP_063577162.1  tumor necrosis factor receptor superfamily member 27 isoform X2

    UniProtKB/TrEMBL
    A0A2J8UBA7, A0A8I5UHR9

  11. XM_009234933.4 → XP_009233208.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    See identical proteins and their annotated locations for XP_009233208.1

    UniProtKB/TrEMBL
    A0A2J8UB94, A0A6D2W8U4, H2PVV9
    Related
    ENSPPYP00000022861.2
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  12. XM_054544673.2 → XP_054400648.1  tumor necrosis factor receptor superfamily member 27 isoform X1

  13. XM_009234932.4 → XP_009233207.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    See identical proteins and their annotated locations for XP_009233207.1

    UniProtKB/TrEMBL
    A0A2J8UB94, A0A6D2W8U4, H2PVV9
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  14. XM_024241085.3 → XP_024096853.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    UniProtKB/TrEMBL
    A0A2J8UB94, A0A6D2W8U4, H2PVV9
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  15. XM_063721091.1 → XP_063577161.1  tumor necrosis factor receptor superfamily member 27 isoform X1

RNA

  1. XR_010138941.1 RNA Sequence

  2. XR_008518092.2 RNA Sequence

Nucleotide Protein
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