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EMP1 epithelial membrane protein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100415615, updated on 8-Mar-2024

Summary

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Gene symbol
EMP1
Gene description
epithelial membrane protein 1
See related
Ensembl:ENSCJAG00000021624
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (8178853..8199033, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (8100701..8120902, complement)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit 2B Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC128928686 Neighboring gene germ cell associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial membrane protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    8178853..8199033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009003300.4 → XP_009001548.1  epithelial membrane protein 1

    See identical proteins and their annotated locations for XP_009001548.1

    UniProtKB/TrEMBL
    F7ILG1
    Related
    ENSCJAP00000040252.2
    Conserved Domains (1) summary
    pfam00822
    Location:1 → 154
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_002752121.6 → XP_002752167.1  epithelial membrane protein 1

    See identical proteins and their annotated locations for XP_002752167.1

    UniProtKB/TrEMBL
    F7ILG1
    Conserved Domains (1) summary
    pfam00822
    Location:1 → 154
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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Gene LinkOut

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