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SPACA6 sperm acrosome associated 6 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100414499, updated on 8-Mar-2024

Summary

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Gene symbol
SPACA6
Gene description
sperm acrosome associated 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (43737681..43753915)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (45061092..45077538)

Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene sialic acid-binding Ig-like lectin 14 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC118150087 Neighboring gene zinc finger protein 577 Neighboring gene hyaluronan synthase 1 Neighboring gene uncharacterized LOC103790037

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm acrosome membrane-associated protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071463.1 Reference mCalJa1.2.pat.X

    Range
    43737681..43753915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035283975.2 → XP_035139866.1  sperm acrosome membrane-associated protein 6 isoform X3

  2. XM_017968064.3 → XP_017823553.2  sperm acrosome membrane-associated protein 6 isoform X1

  3. XM_017968065.3 → XP_017823554.2  sperm acrosome membrane-associated protein 6 isoform X2

    Conserved Domains (1) summary
    smart00409
    Location:116 → 189
    IG; Immunoglobulin

  4. XM_035283972.2 → XP_035139863.1  sperm acrosome membrane-associated protein 6 isoform X5

  5. XM_035283971.2 → XP_035139862.1  sperm acrosome membrane-associated protein 6 isoform X4

  6. XM_008988521.5 → XP_008986769.2  sperm acrosome membrane-associated protein 6 isoform X6

    UniProtKB/TrEMBL
    F7DTC0
    Conserved Domains (1) summary
    smart00409
    Location:157 → 230
    IG; Immunoglobulin

  7. XM_035283974.1 → XP_035139865.1  sperm acrosome membrane-associated protein 6 isoform X7

Nucleotide Protein
Heading Accession and Version

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