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DSG1 desmoglein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100413725, updated on 8-Mar-2024

Summary

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Gene symbol
DSG1
Gene description
desmoglein 1
See related
Ensembl:ENSCJAG00000020778
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human all
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Genomic context

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Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (69496879..69536120)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (70596363..70632560)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene desmocollin 2 Neighboring gene desmocollin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene desmoglein 4 Neighboring gene desmoglein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gamma-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in desmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desmoglein-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    69496879..69536120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002757146.6 → XP_002757192.1  desmoglein-1

    UniProtKB/TrEMBL
    F7IT33
    Related
    ENSCJAP00000038664.2
    Conserved Domains (3) summary
    cd11304
    Location:161 → 265
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam00028
    Location:54 → 148
    Cadherin; Cadherin domain
    pfam01049
    Location:705 → 760
    Cadherin_C; Cadherin cytoplasmic region
Nucleotide Protein
Heading Accession and Version

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