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MYC MYC proto-oncogene, bHLH transcription factor [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100407754, updated on 3-Apr-2024

Summary

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Gene symbol
MYC
Gene description
MYC proto-oncogene, bHLH transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
CMyc
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 16 NC_071457.1 (67886014..67890641, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 16 NC_048398.1 (68030800..68035883, complement)

Chromosome 16 - NC_071457.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene U1 spliceosomal RNA Neighboring gene keratin-associated protein 10-4-like Neighboring gene uncharacterized LOC108588565 Neighboring gene zinc transporter ZIP1-like Neighboring gene uncharacterized LOC108588593

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gibbon and marmoset c-myc nucleotide sequences. Eladari ME, et al. Gene, 1992 Jul 15. PMID 1634119
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myc proto-oncogene protein
Names
Myc proto-oncogene protein
Proto-oncogene c-Myc
Transcription factor p64
v-myc avian myelocytomatosis viral oncogene homolog
v-myc myelocytomatosis viral oncogene homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071457.1 Reference mCalJa1.2.pat.X

    Range
    67886014..67890641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008983271.4 → XP_008981519.1  myc proto-oncogene protein

    See identical proteins and their annotated locations for XP_008981519.1

    UniProtKB/Swiss-Prot
    P49032
    UniProtKB/TrEMBL
    A0A8I3UD46
    Conserved Domains (2) summary
    cd11458
    Location:350 → 433
    bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins
    pfam01056
    Location:6 → 344
    Myc_N; Myc amino-terminal region

  2. XM_035276808.2 → XP_035132699.1  myc proto-oncogene protein

    UniProtKB/Swiss-Prot
    P49032
    UniProtKB/TrEMBL
    A0A8I3UD46
    Conserved Domains (2) summary
    cd11458
    Location:350 → 433
    bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins
    pfam01056
    Location:6 → 344
    Myc_N; Myc amino-terminal region

  3. XM_054246716.1 → XP_054102691.1  myc proto-oncogene protein

    UniProtKB/Swiss-Prot
    P49032
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P49032.1 GenPept UniProtKB/Swiss-Prot:P49032

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