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B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100407247, updated on 8-Mar-2024

Summary

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Gene symbol
B3GNT2
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
See related
Ensembl:ENSCJAG00000008690
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 14 NC_071455.1 (49965983..49995710, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 14 NC_048396.1 (48926765..48956490, complement)

Chromosome 14 - NC_071455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128929625 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC128929627 Neighboring gene copper metabolism domain containing 1 Neighboring gene heterogeneous nuclear ribonucleoproteins C1/C2-like Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071455.1 Reference mCalJa1.2.pat.X

    Range
    49965983..49995710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017964285.2 → XP_017819774.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7DAC3
    Conserved Domains (1) summary
    cl21608
    Location:156 → 345
    Galactosyl_T; Galactosyltransferase

  2. XM_002757714.5 → XP_002757760.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    See identical proteins and their annotated locations for XP_002757760.1

    UniProtKB/TrEMBL
    F7DAC3
    Related
    ENSCJAP00000015975.2
    Conserved Domains (1) summary
    cl21608
    Location:156 → 345
    Galactosyl_T; Galactosyltransferase

  3. XM_035272475.2 → XP_035128366.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7DAC3
    Conserved Domains (1) summary
    cl21608
    Location:156 → 345
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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