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SEPTIN8 septin 8 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100405800, updated on 8-Mar-2024

Summary

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Gene symbol
SEPTIN8
Gene description
septin 8
See related
Ensembl:ENSCJAG00000013225
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
SEPT8; Septin-8
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (72478088..72505938)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (73989903..74017761)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene shroom family member 1 Neighboring gene sosondowah ankyrin repeat domain family member A Neighboring gene cyclin I family member 2 Neighboring gene kinesin family member 3A Neighboring gene interleukin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    72478088..72505938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035290859.2 → XP_035146750.1  septin-8 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MPB1, A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:63 → 331
    CDC_Septin; CDC/Septin GTPase family

  2. XM_035290860.2 → XP_035146751.1  septin-8 isoform X4

    UniProtKB/TrEMBL
    A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:63 → 329
    CDC_Septin; CDC/Septin GTPase family

  3. XM_035290863.2 → XP_035146754.1  septin-8 isoform X7

    UniProtKB/TrEMBL
    A0A2R8M7W8, A0A2R8ND41, A0A8J8Y0E6, U3BP01
    Conserved Domains (1) summary
    cd01850
    Location:41 → 309
    CDC_Septin; CDC/Septin GTPase family

  4. XM_035290864.2 → XP_035146755.1  septin-8 isoform X8

    UniProtKB/TrEMBL
    A0A8J8Y0E6, U3C5J3
    Conserved Domains (1) summary
    cd01850
    Location:41 → 307
    CDC_Septin; CDC/Septin GTPase family

  5. XM_035290872.2 → XP_035146763.1  septin-8 isoform X15

    UniProtKB/TrEMBL
    F7H367, F7H5A5
    Conserved Domains (1) summary
    cd01850
    Location:41 → 309
    CDC_Septin; CDC/Septin GTPase family

  6. XM_035290870.2 → XP_035146761.1  septin-8 isoform X13

    UniProtKB/Swiss-Prot
    B0KWP7
    UniProtKB/TrEMBL
    U3CN90
    Conserved Domains (1) summary
    cd01850
    Location:41 → 309
    CDC_Septin; CDC/Septin GTPase family

  7. XM_035290873.2 → XP_035146764.1  septin-8 isoform X16

    UniProtKB/TrEMBL
    F7H5A5
    Conserved Domains (1) summary
    cd01850
    Location:41 → 307
    CDC_Septin; CDC/Septin GTPase family

  8. XM_035290871.2 → XP_035146762.1  septin-8 isoform X14

    UniProtKB/TrEMBL
    U3CN90
    Conserved Domains (1) summary
    cd01850
    Location:41 → 307
    CDC_Septin; CDC/Septin GTPase family

  9. XM_035290869.2 → XP_035146760.1  septin-8 isoform X12

    UniProtKB/TrEMBL
    F7H5A5
    Conserved Domains (1) summary
    cd01850
    Location:63 → 329
    CDC_Septin; CDC/Septin GTPase family

  10. XM_035290866.2 → XP_035146757.1  septin-8 isoform X10

    UniProtKB/TrEMBL
    U3CN90
    Conserved Domains (1) summary
    cd01850
    Location:63 → 329
    CDC_Septin; CDC/Septin GTPase family

  11. XM_035290867.2 → XP_035146758.1  septin-8 isoform X11

    UniProtKB/TrEMBL
    F7H5A5
    Conserved Domains (1) summary
    cd01850
    Location:63 → 331
    CDC_Septin; CDC/Septin GTPase family

  12. XM_035290865.2 → XP_035146756.1  septin-8 isoform X9

    UniProtKB/TrEMBL
    U3CN90
    Conserved Domains (1) summary
    cd01850
    Location:63 → 331
    CDC_Septin; CDC/Septin GTPase family

  13. XM_035290862.2 → XP_035146753.1  septin-8 isoform X6

    UniProtKB/TrEMBL
    A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:53 → 319
    CDC_Septin; CDC/Septin GTPase family

  14. XM_035290856.2 → XP_035146747.1  septin-8 isoform X1

    UniProtKB/TrEMBL
    A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:75 → 343
    CDC_Septin; CDC/Septin GTPase family

  15. XM_035290861.2 → XP_035146752.1  septin-8 isoform X5

    UniProtKB/TrEMBL
    A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:53 → 321
    CDC_Septin; CDC/Septin GTPase family

  16. XM_035290858.2 → XP_035146749.1  septin-8 isoform X2

    UniProtKB/TrEMBL
    A0A8J8Y0E6
    Conserved Domains (1) summary
    cd01850
    Location:36 → 304
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B0KWP7.1 GenPept UniProtKB/Swiss-Prot:B0KWP7

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