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GLCCI1 glucocorticoid induced 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403569, updated on 8-Mar-2024

Summary

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Gene symbol
GLCCI1
Gene description
glucocorticoid induced 1
See related
Ensembl:ENSCJAG00000000713
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (47923711..48069514, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (48719989..48865605, complement)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108592867 Neighboring gene uncharacterized LOC118143682 Neighboring gene islet cell autoantigen 1 Neighboring gene peptidyl-prolyl cis-trans isomerase-like 4 Neighboring gene uncharacterized LOC118143810 Neighboring gene G2/mitotic-specific cyclin-B2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucocorticoid-induced transcript 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    47923711..48069514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054237268.1 → XP_054093243.1  glucocorticoid-induced transcript 1 protein isoform X3

  2. XM_054237271.1 → XP_054093246.1  glucocorticoid-induced transcript 1 protein isoform X6

  3. XM_054237267.1 → XP_054093242.1  glucocorticoid-induced transcript 1 protein isoform X2

  4. XM_054237270.1 → XP_054093245.1  glucocorticoid-induced transcript 1 protein isoform X5

  5. XM_035254912.2 → XP_035110803.1  glucocorticoid-induced transcript 1 protein isoform X1

    UniProtKB/TrEMBL
    F6ZI06
    Conserved Domains (1) summary
    pfam15388
    Location:165 → 475
    FAM117; Protein Family FAM117

  6. XM_054237269.1 → XP_054093244.1  glucocorticoid-induced transcript 1 protein isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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