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HFM1 helicase for meiosis 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100401763, updated on 3-Apr-2024

Summary

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Gene symbol
HFM1
Gene description
helicase for meiosis 1
See related
Ensembl:ENSCJAG00000001843
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 7 NC_071448.1 (125949695..126076426, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 7 NC_048389.1 (127369665..127496093, complement)

Chromosome 7 - NC_071448.1Genomic Context describing neighboring genes Neighboring gene RCC1 and BTB domain-containing protein 1-like Neighboring gene zinc finger protein 644 Neighboring gene actin, cytoplasmic 2-like Neighboring gene U2 spliceosomal RNA Neighboring gene PHD finger protein 11 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent DNA helicase HFM1
Names
HFM1, ATP dependent DNA helicase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071448.1 Reference mCalJa1.2.pat.X

    Range
    125949695..126076426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035252115.2 → XP_035108006.2  probable ATP-dependent DNA helicase HFM1 isoform X2

  2. XM_035252117.2 → XP_035108008.2  probable ATP-dependent DNA helicase HFM1 isoform X5

  3. XM_035252118.2 → XP_035108009.2  probable ATP-dependent DNA helicase HFM1 isoform X6

  4. XM_017974927.4 → XP_017830416.3  probable ATP-dependent DNA helicase HFM1 isoform X3

    UniProtKB/TrEMBL
    F6XU04

  5. XM_009001674.4 → XP_008999922.3  probable ATP-dependent DNA helicase HFM1 isoform X1

  6. XM_035252119.2 → XP_035108010.2  probable ATP-dependent DNA helicase HFM1 isoform X7

  7. XM_035252116.2 → XP_035108007.2  probable ATP-dependent DNA helicase HFM1 isoform X4

  8. XM_035252114.2 → XP_035108005.2  probable ATP-dependent DNA helicase HFM1 isoform X1

  9. XM_035252121.2 → XP_035108012.2  probable ATP-dependent DNA helicase HFM1 isoform X3

    UniProtKB/TrEMBL
    F6XU04
Nucleotide Protein
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